All
cells have:
1. Cell or plasma membrane (separates the cell from
the outer environment)
2. Genetic material
(DNA)
3. Cytoplasm.
A. Prokaryotic
("before nucleus") - a cell lacking a membrane-bound nucleus &
membrane-bound organelles (ex.
bacteria); these cells do have some organelles, but they are not membrane-bound; all
prokaryotic cells have a cell wall, its primary component being peptidoglycan; prokaryotic
cells are much smaller than eukaryotic cells (about 10 times smaller); their small size
allows them to grow faster & multiply more rapidly than eukaryotic cells (they have a
higher surface area to volume ratio than larger cells; thus, because they are small, they
can easily meet their modest nutritional needs and grow rapidly). This group includes all bacteria.
B. Eukaryotic
("true nucleus") - a cell having a membrane-bound nucleus & membrane-bound
organelles (little organs specialized structures that perform specific
functions within the cell); evolved about 2 million years after the prokaryotes; cell
walls are sometimes present, but they are composed of cellulose or chitin; organisms with
eukaryotic cells include fungi, algae, protozoa, plants, & animals.
It
is important to know the differences between prokaryotic and eukaryotic cells; allows us
to control disease-causing bacteria without harming our own cells.
1. Pili
- straight hairlike appendages; they are usually short; all gram negative bacteria have
pili; function is to attach bacteria to other bacteria, other cells, or other surfaces
(not for locomotion):
a.
sex
pili
allow one bacterial cell to adhere to another (cells can actually exchange genetic
material through the pili - this is the closest bacteria get to sexual reproduction!);
called conjugation.
b. other
types of pili attach bacteria to plant or animal cells to maintain themselves in a
favorable environment; if pili have been lost (maybe due to a mutation) in disease-causing
bacteria, the bacteria will not be able to establish an infection.
2. Flagella
(singular flagellum) - long, thin
structures that extend outward from the surface of the envelope; function is locomotion -
bacteria with flagella are motile;
flagella rotate to propel the bacterium. Bacteria
can have 1, 2, or many flagella (ex. of a bacteria with many flagella Salmonella).
3. Axial
Filaments -
bundles of flagella which wrap around the cell body between the cell wall and the outer
membrane; together they form a helical bulge that moves like a corkscrew as the entrapped
flagella turn & propel the cell; found only in one type of bacteria called the spirochetes;
this unique form of movement is well suited to the viscous environment (mud & mucous)
where the bacteria is generally found. Ex. of
bacteria with a.f. Treponema (causes
syphilis) and Borrelia (causes Lyme disease).
B. Cell Envelope
(layers from outside to inside) (BE
ABLE TO DIAGRAM!)
1. Glycocalyx
- found in most bacteria; slimy or gummy substance that becomes the outermost layer of the
cell envelope; a thick glycocalyx is often called a capsule; a thin glycocalyx is
often called a slime layer; functions:
a.
protection
from drying out
b.
helps
a cell adhere to a surface where conditions are favorable for growth
c.
provide
protection against phagocytosis (engulfment & destruction by cells such as
white blood cells) - a slippery glycocalyx makes it difficult for the phagocyte to grab
hold of the bacterium.
2. Outer
Membrane - primarily
found in gram negative bacteria
(ex. E. coli, Salmonella, Shigella, Pseudomonas,
Proteus, Neisseria gonorrhoeae); composed of a bilayer membrane; the inner layer is
composed of phospholipids; the outer layer is composed of lipopolysaccharides
(LPSs), a compound that's not found in any other living organism!; part of the LPS
is hydrophobic, part is hydrophilic; most molecules are transported across the outer
membrane and into the cell through special proteins called porins; these porins create small pores or
channels in the outer membrane that allow molecules to diffuse in; function of the outer
membrane is mainly protection - because of the outer membrane, gram negative bacteria are
generally more resistant than gram positive bacteria to many toxic compounds, including
antibiotics (antibiotics are too large to diffuse through the porins).
More
about LPSs These compounds are endotoxins
and are only released when the bacteria die and their cell walls are broken down. Endotoxins cause fever and dilate blood vessels
(drop in blood pressure results). Killing the
bacteria may increase the concentrations of this toxin!
3. The
Cell Wall - The
structure described below is found in all eubacteria except the mycoplasmas (these
bacteria lack a cell wall); in archaeobacteria, the cell walls are composed of a different
type of peptidoglycan or protein & some do not have cell walls. In gram negative bacteria, the cell wall lies just
inside the periplasm; in gram positive bacteria, it lies just inside the glycocalyx, if
one exists.
a. Structure
& Composition of Cell Wall in Eubacteria
1.) The
chief component is peptidoglycan.
2.) Peptidoglycan
is composed of long chains of polysaccharides (glycan) cross-linked by short proteins
(peptides).
3.) When
linked together these chains create the single rigid mesh-like molecule that forms the
bacterial cell wall (resembles a chain link fence!)
4.) A
major difference between G(+) & G(-) bacterial cell walls:
a.) G(-): peptidoglycan mesh is only one layer thick.
b.) G(+): peptidoglycan wall is many layers thick.
b. Cell
Wall Function In
many cases, the cell wall is very porous and does not regulate the transport of substances
into the cell. Two major functions of the
cell wall are maintaining shape and withstanding turgor pressure. Both are discussed below.
1.) Cell
Shape
- one fxn. of the cell wall is to confer shape on the bacterium; most bacteria fall into
one of these general groups. However, some
bacteria have irregular shapes. Even bacteria
of the same kind or within the same culture sometimes vary in size and shape (especially
in aging cultures).
a.) cocci (singular - coccus) -
spherical
b.) bacilli (singular - bacillus) -
rod-shaped
c.) spirilli (singular - spirillum) -
spiral-shaped
d.) vibrio
- comma-shaped
In
addition to these characteristic cell shapes, cells can also be found in distinctive
groups of cells: pairs, chains, tetrads
(cubes), grape-like clusters, etc.
2.) Withstanding
Turgor pressure A
cell's turgor pressure is the internal pressure from its contents. Ordinarily, a bacterium is in a hypotonic solution
(a more dilute solution that has less solute and more water than the inside of the
bacterium) and water tries to move from a high water concentration to a low water
concentration; that is, water tries to move inside the bacterium (see tonicity under
osmosis later in the handout). Without the
cell wall, the water would continue to more inside the cell, and the cell would lyse or
burst; the cell wall withstands turgor pressure, so that the cell does not lyse.
Action
of some antibiotics (ex. penicillin) - Bacteria produce enzymes that reseal breaks in the
peptidoglycan cell wall that occur during normal growth and division; penicillin binds to
these enzymes, inactivating the enzymes so that the breaks cannot be resealed. The bacteria then lyse.
Lysozyme,
an enzyme found in tears, digests (breaks down) peptidoglycan.
c.
Mycoplasmas
- group
of bacteria that lack a cell wall; they avoid lysis from turgor pressure by maintaining a
nearly equal pressure between their cytoplasm and their external environment by actively
pumping sodium ions out of the cell; additionally, their cell membranes are strengthened
because they contain cholesterol, a lipid found in eukaryotic cell membranes.
4. Periplasm
- used
to be called a space, because of the way it looked in electron micrographs; found between
the cell membrane and the peptidoglycan cell wall; therefore, only found in gram negative
cells; composed of a gelatinous material containing proteins; one function of these
proteins is that break down certain nutrients into smaller molecules that can pass through
the cell membrane.
5. Plasma
or Cell Membrane - membrane
that encloses the cytoplasm of any cell; major function is to contain the cytoplasm and to
transport and regulate what comes in and what goes out of the cell. Many prokaryotic cell membranes are similar to
eukaryotic cell membranes. Its structure is
referred to as the Fluid Mosaic Model,
because the structure behaves more like a fluid than a solid. Contains:
Membrane Lipids: (composed
primarily of phospholipid molecules)
a.) phospholipid
bilayer (hydrophobic fatty acid tails & hydrophilic
phosphate heads review chemistry handout on phospholipids)
Membrane Proteins: (proteins float in the fluid lipid bilayer)
a.)
Integral
proteins - inserted
in the bilayer; mainly involved in transport.
1.) carrier
proteins -
bind to specific substances & transport them across the cell membrane.
2.) channel
proteins - proteins
with a channel through which small, water soluble substances move across the cell
membrane.
b.) Peripheral
proteins -
usually attached to membrane surface; some are enzymes; some are involved in the electron
transport chain and/or photosynthesis (well talk about these processes in the
metabolism chapter); others are involved in the changes in cell shape that occur during
cell division.
Note: Archaeobacteria
Cell Membranes - there are different kinds of bonds in the phospholipid molecules that
link the lipids (tails) to the glycerol molecule (head); these bonds are stronger and
may help these bacteria survive extreme temperature and pH.
Cell
Membrane Invaginations - the cell membrane sometimes invaginates or folds
back on itself, forming structures that extend into the cytoplasm; since prokaryotic cells
lack organelles, these invaginations provide increased surface area for peripheral
proteins (enzymes) to catalyze chemical reactions.
C. Cytoplasm
- matrix composed primarily of water (90%) & proteins.
Contains the following:
1. Nucleoid
- or nuclear region is a mass of DNA; well defined, although it is not surrounded by a
membrane; most of a bacterium's DNA is arranged in a single circular molecule called a chromosome; some bacteria also contains smaller
circular DNA molecules called plasmids (to be
discussed later).
2. Ribosomes
- site of protein synthesis; prokaryotic ribosomes are smaller than eukaryotic ribosomes. Antibiotics such as tetracycline, erythromycin,
and streptomycin can specifically target bacterial ribosomes & not harm the host's
eukaryotic ribosomes.
3. Endospores
- extremely hardy, resting (non-growing) structures that some bacteria, principally G(+),
produce through the process of sporulation when nutrients are exhausted; when favorable
conditions return, endospores germinate to produce new vegetative cells, which grow &
reproduce; they are able to withstand harsh environmental conditions because they contain
so little water and high concentrations of calcium and dipicolinic acid; when favorable
conditions return, the spore germinates into a new vegetative cell.
Some
of endospore-producing bacteria are pathogenic to humans.
Ex. Clostridium tetani causes tetanus
(other species of this genus cause botulism and gas gangrene). Bacillus
is another genus of bacteria that forms spores. We
will learn how to stain bacteria so you may observe these spores.
1. Cilia
- short,
hairlike, motile cellular extensions that occur on the surfaces of certain cells; ex. some
protozoa (called Ciliates) use cilia for motility & feeding.
2. Flagella
- in humans, the single, long, hairlike cellular extension that occurs in sperm cells;
beat in waves (prokaryotic flagella rotate!);
some protozoans use flagella for motility.
B. Cell Wall
1. Animal
cells - no cell wall!
2. Plant
cells - made of cellulose
3. Fungi
- in most made of cellulose; some made of chitin (polysaccharide containing nitrogen -
similar to exoskeletons of insects) and cellulose.
4. Algae
- made of cellulose
5. Protozoans
- no cell wall!
C. Glycocalyx
- A glycocalyx may exist outside the plasma
membrane; composed of carbohydrate chains from glycoproteins in cell membrane.
D. Plasma
Membrane - already described; differences are between prokaryotes & eukaryotes:
1. proteins
involved in electron transport chain and photosynthesis are not found in cell membrane,
but are found in cytoplasmic organelles (mitochondria and chloroplast respectively), and
2. cell
membrane contains cholesterol (in prokaryotes, only mycoplasmas have cholesterol in their
cell membrane).
E. Cytoplasm
1. Cytoskeleton (not
found in prokaryotes)
a.
structure
- network of filamentous protein structures.
b. functions
- give the cell shape (support & rigidity); anchor the organelles; transport substances through the cell
(cytoplasmic streaming), cytoplasmic streaming also enables some eukaryotes to move
(formation of pseudopods); involved in cell division; involved in cell motility
(flagella).
F. Nucleus
1. Structure in eukaryotic cells:
a.
nuclear
envelope
- double membrane with nuclear pores that surrounds the nucleus.
b. chromosomes
- genetic material composed of DNA & associated; chromosomes are linear.
2. Function:
a.
carrier
of the hereditary information, which exerts a continuing influence over the ongoing
activities of the cell through protein synthesis; "control center of the cell."
b. isolates
the DNA in eukaryotic cells.
G. Ribosomes
(may
be free in the cytoplasm or attached to rough endoplasmic reticulum & the nucleus)
1.
Structure
- not membrane-bound; made up of RNA & protein.
2.
Function
- sites of protein synthesis (where amino acids are assembled into polypeptides).
H. Membrane-bound
Organelles - Eukaryotic
cells have specializes membrane-bound organelles that carry out specific functions such as
photosynthesis (chloroplasts), ATP production (mitochondria), lipid & protein
synthesis (endoplasmic reticulum, golgi complex), cellular digestion (lysosomes), &
transport (vesicles). We will not discuss
these organelles in detail, since the focus of this class will be on prokaryotes. You will discuss these organelles in detail in
Anatomy & Physiology I.
a. ENDOPLASMIC RETICULUM
1.)
Structure: interconnecting
flattened sacs, tubes, & channels.
2.)
Types
& Functions: (both
types support the cytoplasm & provide more surface area inside the cell for chemical
reactions to take place)
a.)
rough
E. R. - (ribosomes
are attached to it) - function: initial modification of proteins; process: polypeptide
chains are formed at the ribosome & some of them are transported into the r. e. r. for
modification; the polypeptides are then packaged in transport
vesicles or sacs (a piece of the e. r. pinches off around the polypeptide); these
vesicles transport the polypeptides to the golgi complex for further modification into
proteins.
b.)
smooth
E. R. - (no
ribosomes attached) - function: main site of lipid synthesis; lipids are then sent
to the golgi body in transport vesicles for further modification & distribution.
b. GOLGI COMPLEX
1.) Structure
- 4 to 8 flattened, membrane-bound sacs loosely stacked on top of one another surrounded
by vesicles; looks like a stack of pancakes.
2.) Function
- final modification of proteins & lipids.
3.) Process:
transport
vesicles from the r.e.r. or s.e.r. fuse with the golgi complex; proteins & lipids are
processed in the golgi complex; the finished product is pinched off in a piece of golgi
membrane (another vesicle) & is transported to the part of the cell where it is
needed; the golgi complex processes,
packages, & distributes the material the cell manufactures (the Wal-Mart
distribution center).
c.
VESICLES
1.) Structure
- membrane-bound sacs that could be pinched off pieces of golgi complex, E.R., or cell
membrane
2.) Function
- transport material within the cell & into & out of the cell.
3.) Some
specialized vesicles:
a.) Lysosomes
- contain enzymes for breaking down proteins, lipids, etc. (digestion within the cell);
they fuse with other vesicles (such as phagocytic vesicles) to degrade or digest their
contents.
b.) Peroxisomes
contain enzymes (peroxisomes) that break down toxic hydrogen peroxide into water and
oxygen (you see the oxygen bubbles when you apply hydrogen peroxide to tissue).
d.
MITOCHONDRIA
1.) Structure
- usually shown oval shaped; double membrane: smooth outer membrane & a folded inner
membrane (folds provide more surface area for chemical reactions to take place).
2.) Function
- break down energy containing organic molecules (ex. carbohydrates) & repackage the
energy into smaller units (ATP) that can be used by the cells; called the
"powerhouse" of the cell.
e.
CYTOSKELETON
1.) Structure
- network of filamentous protein structures called microtubules & microfilaments.
2.) Functions
- give the cell shape (support), anchor the organelles, transport substances through the
cell, involved in cell division.
f.
CENTRIOLES
1.) Structure
- paired cylindrical structures composed of protein filaments
2.) Function
- during cell division, organize a microtubule network, called spindle fibers; spindle
fibers are responsible for moving the chromosomes around in the cell during division.
A. PASSIVE TYPES OF TRANSPORT ACROSS THE CELL
MEMBRANE
1. Most passive transport processes depend on the
process of DIFFUSION
a.
Definition
- the net movement of particles from a greater concentration to a lower concentration
(down a concentration gradient) to distribute the particles uniformly; it's a passive process - molecules move by their own kinetic energy -
requires no energy expenditure by the cell (no ATP); molecules will diffuse freely until
an equilibrium is reached (equal distribution on both sides)
b. Simple
Diffusion through the Cell Membrane - The lipid interior of the cell membrane is a
barrier to simple diffusion; most polar molecules (polar molecules get "stuck"
in the nonpolar fatty acid tails). Small,
nonpolar, lipid soluble molecules like fats, carbon dioxide, oxygen, & alcohol
move easily through the cell membrane by simple diffusion.
Polar & charged molecules can diffuse through the membrane if they are small
enough to pass through pores in channel proteins.
c.
Osmosis
- a special case of diffusion; the movement of water across a semipermeable membrane -
water moves from a high water concentration to a low water concentration (or from a low
solute concentration to a high solute concentration); water moves across cellular
membranes through pores in channel proteins or through momentary openings in the membrane.
Tonicity: (describes
the relative concentrations of solute in two fluids, such as the fluid inside &
outside a cell); 3 cases:
1.) isotonic
solutions
("iso" = same) - two or more solutions that have equal concentrations of solute.
2.) hypotonic
solution ("hypo"
= less) - one solution has less solute (more water) than the other; a cell that is
in a hypotonic environment will lyse (burst);
ex. placing a cell in distilled water would
cause the cell to lyse - water would move into the cell to where the water concentration
is lower.
3.) hypertonic solution ("hyper" = more) - one solution has
more solute (less water) than the other; a cell that is in a hypertonic
environment will crenate (shrink), because the water in the cell
moves out of the cell to an area of lower water concentration; ex. placing a cell in water with a high salt or sugar concentration would cause the cell
to crenate water would move out of the cell to where the water concentration is
lower.
Note: The
above examples describe the environment that the cell is in (i. e., the solution is
hypotonic or hypertonic to the cell). You
can also talk about the cell in relation to its environment (i. e., the cell is hypertonic
or hypotonic to its environment). You have to
make this distinction!! The cells in our
bodies try to maintain the isotonic condition so that they are not in danger of lysing or
crenating.
d. Facilitated
Diffusion
- Again, only small, nonpolar molecules readily diffuse across the cell membrane. Polar & charged molecules get
"stuck" in the fatty acid part of the lipid bilayer. Small, polar molecules, like water, and some ions
can diffuse through channel proteins. Most biologically important molecules, however,
are polar & are much larger than water (ex. glucose) and cannot fit through channel
proteins. Special selective carrier proteins are located in the membrane to
transport molecules like glucose. In
facilitated diffusion, carrier proteins move molecules from a high concentration to a low
concentration like in simple diffusion; it is believed that changes in the shape of the
carrier protein allow it to envelop and then release the transported substance.
Note: Few
prokaryotes transport in this way; but may compounds, including most sugars, enter
most eukaryotic cells in this way.
B. ACTIVE TYPES OF TRANSPORT ACROSS THE CELL MEMBRANE
These processes use
energy (ATP)!!!
1. Active Transport -
Carrier proteins move molecules move from low concentration to high concentration (against
the concentration gradient). Example:
a.
In
prokaryotes - most
nutrients are transported in this way because many prokaryotes live in low nutrient
environments; group translocation is a form of
active transport that occurs in some prokaryotes with certain molecules; in group
translocation, a molecule is transported into the cell and at the same time chemically
changed in to a slightly different molecule; this occur so that the molecule cannot leave
the cell.
2. Vesicle
Mediated Transport by Eukaryotes
- We will concentrate on the type of vesicle
mediated transport called endocytosis, since
this is how white blood cells eat bacteria, etc.
a.
Endocytosis
- substances are imported into the cell; vesicles
(sacs) are formed from the cell membrane, sometimes in response to the triggering of a
receptor membrane protein (called receptor-mediated endocytosis); the cell membrane
envelopes the substance to be imported & pinches off to form a vesicle that moves into
the cytoplasm; endocytic vesicles can then fuse with enzyme-containing vesicles called lysosomes to digest their contents.
When
solid material is imported into the cell, this type of endocytosis is specifically
called phagocytosis ("cell eating"); ex. a white blood cell engulfing a bacteria.